2023-2024 / GBIO0011-1

Biological Systems Modelling

Duration

26h Th, 26h Pr

Number of credits

 Bachelor of Science (BSc) in Engineering5 crédits 
 Master of Science (MSc) in Biomedical Engineering5 crédits 

Lecturer

Pierre Dauby, Liesbet Geris

Coordinator

Liesbet Geris

Language(s) of instruction

French language

Organisation and examination

Teaching in the second semester

Schedule

Schedule online

Units courses prerequisite and corequisite

Prerequisite or corequisite units are presented within each program

Learning unit contents

The course is about the mathematical modeling of physiological processes.
It is centered on the modeling, simulation, and analysis of dynamical phenomena that take place in cells or systems physiology.
As far as systems physiology is concerned, examples of subjects are: cardiovacular system, respiratory system, muscle contractoin,...

Learning outcomes of the learning unit

The objective of the course is to master simulation and mathematical analysis tools needed to understand the basic mechanisms of physiological processes as described in  the literature.

This course contributes to the learning outcomes I.1, I.2, II.1, II.2, III.1, III.2, IV.1, VI.1, VI.2, VII.2, VII.4 of the BSc in engineering.

Prerequisite knowledge and skills

Mathematical training of the bachelor degree of engineering and, ideally, an introductory course in physiology.

Planned learning activities and teaching methods

26h of theory + 26h of classroom or/and computer sessions.

Mode of delivery (face to face, distance learning, hybrid learning)

Face-to-face course


Additional information:

Practical information about the course organization will be available on eCampus.
   

Recommended or required readings

The course is based on the textbook
"Mathematical physiology", J. Keener
and J. Sneyd, Springer-Verlag, 2009.

Exam(s) in session

Any session

- In-person

written exam

Written work / report


Additional information:

The course consists of two parts (modeling at the cellular level (L. Geris) and systems modeling (P.C. Dauby)), which have equal weight in the evaluation. Each of these parts is divided into a theoretical part and hands-on work, whose respective weights are 70 and 30%. The hands-on work is composed of homework assignments for modeling at the cellular level and the project for systems modeling; these activities are evaluated only in the first session (the mark obtained is automatically transferred to the second session). The timely submission of the reports and homework assignments associated with the hands-on work is a condition for participation in the written examination. The exam covers the theoretical lessons and, in the first session, possibly also the practical work.  For the second session, the marks >= 12 obtained for the theory in each part can be kept if the student requests it.

 

Work placement(s)

Organisational remarks and main changes to the course

Practical details will be provided on eCampus.
   

Contacts

One of the instructors.

Association of one or more MOOCs